Thermo Scientific Amira for Life & Biomedical Sciences: <https://www.thermofisher.com/ca/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software/amira-life-sciences-biomedical.html>.
A powerful, multifaceted 2D-5D platform for visualizing, manipulating, and understanding life science research data from many image modalities, including CT, MRI, 3D Microscopy, and other techniques. With incredible speed and flexibility, Amira enables advanced 2D-5D bioimaging workflows in research areas ranging from structural and cellular biology, to tissue imaging, neuroscience, preclinical imaging, and bioengineering. Amira is available on the PC in Room B/15C.
Thermo Scientific Avizo Software for Materials Science: <https://www.thermofisher.com/ca/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software/avizo-materials-science.html>.
A reliable, fully automatable, customizable and easy-to-use solution allowing you to innovate faster, and produce more reliable and better performing materials. Avizo Software allows you to better understand your materials structure, properties and performances. No matter what data modality you use, Avizo provides optimized workflows for advanced materials characterization. Avizo is available on the PC in Room B/15C.
Offline Gatan Microscopy Suite (GMS)
<www.gatan.com/installation-instructions>
Scripts for GMS
Offline FEI MAPS Viewer
Image J
<imagej.nih.gov/ij/download.html>
DM3_Reader plugin for ImageJ
<imagej.nih.gov/ij/plugins/DM3_Reader.html>
Fiji - Open source image processing package
em2em: 3DEM Conversion Program
<https://download.imagescience.de/index.html>
Manual - Basic Photoshop for Electron Microscopy
<http://www.nuance.northwestern.edu/docs/epic-pdf/Basic_Photoshop_for_Electron_Microscopy_06-2015.pdf>