McGill.CA / Eastern Canadian Plant Phenotyping Platform / Research / Publications

Selected papers, patents and software code that have arisen from the Multi-Scale Imaging Facility

 

List of peer-reviewed contributions co-authored by imaging core staff

 

Publications marked with an asterisk (*) are directly related to the development of sample preparation, imaging protocol or data analysis method by a Multi-Scale Imaging Facility member.

 

  • Bidhendi AJ, Chebli Y, Geitmann A. 2020. Fluorescence visualization of cellulose and pectin in the primary plant cell wall. Journal of Microscopy 278(3):164-81. DOI: 10.1111/jmi.12895. Link to publication.
  • Bertrand-Rakusová H, Chebli Y, Geitmann A. 2020. Silicone chambers for pollen tube imaging in microstructured in vitro environments. In: Geitmann A, editor. Pollen and Pollen Tube Biology: Methods and Protocols. New York, NY: Springer US; 2020. p. 211-21. DOI: 10.1007/978-1-0716-0672-8_15. Link to publication.
  • Han L, Srocke F, Masek O, Smith DL, Lafond JA, Allaire S, Dutilleul P. 2020. A Graphical-User-Interface application for multifractal analysis of soil and plant structures. Computers and Electronics in Agriculture 174:105454. DOI: 10.1016/j.compag.2020.105454. Link to publication.
  • Kaneda M, van Oostende-Triplet C, Chebli Y, Testerink C, Bednarek SY, Geitmann A. 2019. Plant AP180 N-terminal homolog proteins are involved in clathrin-dependent endocytosis during pollen tube growth in Arabidopsis thaliana. Plant and Cell Physiology 60(6):1316-30. DOI: 10.1093/pcp/pcz036. Link to publication.
  • Altartouri B, Bidhendi AJ, Tani T, Suzuki J, Conrad C, Chebli Y, Liu N, Karunakaran C, Scarcelli G, Geitmann A. 2019. Pectin chemistry and cellulose crystallinity govern pavement cell morphogenesis in a multi-step mechanism. Plant Physiology181(1):127-41. DOI: 10.1104/pp.19.00303. Link to publication
  • Beaulieu J, Dutilleul P. 2019. Applications of computed tomography (CT) scanning technology in forest research: a timely update and review. Canadian Journal of Forest Research 49(10):1173-88. DOI: 10.1139/cjfr-2018-0537. Link to publication.
  • Chebli Y, Geitmann A. 2018. FRAP experiments show pectate lyases promote pollen germination and lubricate the path of the pollen tube in Arabidopsis thaliana. Microscopy and Microanalysis 24(S1):1376-7. DOI: 10.1017/S1431927618007365. Link to publication.

 

List of contributions that used an infrastructure of the Facility
Publications that acknowledge the Facility are marked with an asterisk (see section D for more details).

 

Peer reviewed Papers

 

  • Saad M, Chinerman D, Tabrizian M, Faucher SP. 2020. Identification of two aptamers binding to Legionella pneumophila with high affinity and specificity. Nature Scientific Reports 10(1):9145. DOI: 10.1038/s41598-020-65973-3. Link to publication.
  • Bidhendi AJ, Zamil MS, Geitmann A. 2020. Assembly of a simple scalable device for micromechanical testing of plant tissues. Methods in cell biology: Academic Press; 2020. Link to publication.
  • Valenzuela G, Castro LE, Valencia-Zamora J, Vera-Arias CA, Rohrbach P, Sáenz FE. 2019. Genotypes and phenotypes of resistance in Ecuadorian Plasmodium falciparum. Malaria Journal 18(1):415. DOI: 10.1186/s12936-019-3044-z. Link to publication.
  • Saleh D, Jarry J, Rani M, Aliferis KA, Seguin P, Jabaji SH. 2019. Diversity, distribution and multi-functional attributes of bacterial communities associated with the rhizosphere and endosphere of timothy (Phleum pratense L.). Journal of Applied Microbiology127(3):794-811. DOI: 10.1111/jam.14334. Link to publication.
  • Reiling SJ, Rohrbach P. 2019. Uptake of a fluorescently tagged chloroquine analogue is reduced in CQ-resistant compared to CQ-sensitive Plasmodium falciparum parasites. Malaria Journal 18(1):342. DOI: 10.1186/s12936-019-2980-y. Link to publication.
  • Bidhendi AJ, Li H, Geitmann A. 2019. Modeling the nonlinear elastic behavior of plant epidermis. Botany 98(1):49-64. DOI: 10.1139/cjb-2019-0058. Link to publication.
  • Bidhendi AJ, Altartouri B, Gosselin FP, Geitmann A. 2019. Mechanical stress initiates and sustains the morphogenesis of wavy leaf epidermal cells. Cell Reports 28(5):1237-50.e6. DOI: 10.1016/j.celrep.2019.07.006. Link to publication.
  • Reiling SJ, Krohne G, Friedrich O, Geary TG, Rohrbach P. 2018. Chloroquine exposure triggers distinct cellular responses in sensitive versus resistant Plasmodium falciparum parasites. Nature Scientific Reports 8(1):11137. DOI: 10.1038/s41598-018-29422-6. Link to publication.

 

Patent

 

  • Canada and US patent application no US 16/850,355 – Saad M, Chinerman D, Tabrizian M, Faucher SP. Identification of two aptamers binding to Legionella pneumophila with high affinity and specificity.

 

Software Code

 

  • Han L, Srocke F, Masek O, Smith DL, Lafond JA, Allaire S, Dutilleul P. 2020. A Graphical-User-Interface application for multifractal analysis of soil and plant structures. Computers and Electronics in Agriculture. 174:105454. DOI: 10.1016/j.compag.2020.105454. Link to publication.

 

 

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